My example above was an attempt to explain why I personally might desire to disable a core. As for the logic of it all I will be the first to tell you I do not trust Intels ability to shut down a processor prior to damage as is the case with many other users. Right or wrong this is why I would take an action as described.
I understand how one bad core will affect all the others in the package and is exactly why I would want to shut a bad core down manually if it were exhibiting temperature values to high for personal comfort under load.
Regardless of my logic and understanding I see why this is NOT A BUG in AIDA64 or Real Temp. It is aparrent that AIDA64 is reading values as you should be expected to read them and that Real Temp has tried to correct the presentation of information caused by the abnormal ordering of the logical cores within APIC ID. It looks like both of you are right on this issue, depending on personal viewpoint, and any correction in temperature presentation is clearly no ones responsibility when the root of the problem lies elsewhere. That decision to make a correction now seems more of an internal debate of each softwares author as to how they will procede. There are good arguments to be made for both paths of action. (I can see how this could be compared to painting path lines and placing a walk signal at an intersection where pedestrians were expected not to cross and how that placement would encourage abnormal expectations, clutter the intersection, and provide a safer walk across for those few who go where they should not. Leaving the question, do you decide on safetys side or promoting whats right?)
Firey, you have done what I thought you might which is to offer as good of an explination as capability and information permits. This is one of the reasons I love AIDA64 and the scope of insight it provides. It is a better than good product. AIDA64 is well managed, organized, and coded. I will continue to re-new AIDA64 into the future and I see no other software even close to AIDA64's capability in the market.
Thank you for your time, my understanding has improved as a result of this. In fact I have learned things I did not initially set out to learn because of your dedication to your users.